STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0716TfoX C- domain superfamily. (154 aa)    
Predicted Functional Partners:
GLE_0717
GAF domain protein.
       0.774
GLE_4269
HAD-superfamily hydrolase, subfamily IB.
  
     0.720
GLE_3870
Hypothetical protein.
 
     0.676
GLE_1667
Metallo-beta-lactamase domain protein.
  
     0.612
GLE_5181
YceI like family; Belongs to the UPF0312 family.
  
     0.596
GLE_3956
Hypothetical protein.
  
     0.544
GLE_2711
Hypothetical protein.
  
     0.509
GLE_4785
Hypothetical protein.
  
     0.503
bioD
Dethiobiotin synthase; Catalyzes a mechanistically unusual reaction, the ATP- dependent insertion of CO2 between the N7 and N8 nitrogen atoms of 7,8- diaminopelargonic acid (DAPA) to form an ureido ring.
       0.483
phaC
poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit.
    
 0.478
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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