Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0790Multicopper oxidase. (652 aa)    
Predicted Functional Partners:
copB
Copper resistance protein B.
 
  
 0.944
GLE_0789
DNA polymerase III, subunits gamma and tau-like protein.
       0.773
tatC
Twin arginine-targeting protein translocase TatC; Part of the twin-arginine translocation (Tat) system that transports large folded proteins containing a characteristic twin- arginine motif in their signal peptide across membranes. Together with TatB, TatC is part of a receptor directly interacting with Tat signal peptides.
    
 
 0.757
cueR
Cu(I)-responsive transcriptional regulator.
 
  
 0.718
GLE_0788
Hypothetical protein.
       0.584
GLE_0164
Sensory box histidine kinase.
  
 
 0.576
GLE_0791
Hypothetical protein.
       0.562
GLE_0125
RDD family.
  
  
 0.561
GLE_0350
RDD family.
  
  
 0.561
GLE_0787
Hypothetical protein.
       0.536
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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