Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0794Hypothetical protein. (326 aa)    
Predicted Functional Partners:
GLE_0799
Glycosyl transferase, group 1 family protein.
 
     0.829
GLE_0795
Nitroreductase family protein.
 
     0.687
GLE_0800
O-Antigen Polymerase.
 
     0.527
GLE_1114
Membrane protein, AsmA family.
  
     0.515
GLE_0797
Pirin domain protein; Belongs to the pirin family.
       0.479
GLE_1684
Membrane protein.
  
     0.479
GLE_0796
YceI like family; Belongs to the UPF0312 family.
       0.476
waaA
3-deoxy-D-manno-octulosonic-acid transferase; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
 
     0.447
GLE_1577
Acetyltransferase (GNAT) family.
  
     0.422
GLE_4930
Ankyrin repeat protein.
  
     0.408
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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