STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0837Transcriptional regulator. (762 aa)    
Predicted Functional Partners:
cobA
uroporphyrin-III C-methyltransferase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
 
  
 0.826
GLE_2297
Hypothetical protein.
  
     0.715
GLE_4269
HAD-superfamily hydrolase, subfamily IB.
  
     0.667
GLE_3371
Penicillinase repressor family protein.
  
     0.662
GLE_0968
Lipoprotein.
  
     0.657
GLE_0155
Hypothetical protein.
  
 
 
 0.647
GLE_3755
Hypothetical protein.
  
     0.631
GLE_3458
Cyclic diguanylate phosphodiesterase/diguanylate cyclase.
  
  
  0.621
GLE_3115
Endonuclease/exonuclease/phosphatase family protein.
  
     0.603
GLE_1973
Serine protease, autotransporter barrel domain.
 
     0.581
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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