Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GLE_0163 | GLE_0867 | Hypothetical protein. | Hypothetical protein. | 0.555 |
GLE_0163 | GLE_2271 | Hypothetical protein. | Beta-hexosaminidase. | 0.463 |
GLE_0163 | GLE_2857 | Hypothetical protein. | Lipolytic enzyme, G-D-S-L family. | 0.654 |
GLE_0163 | GLE_3955 | Hypothetical protein. | Membrane protein. | 0.575 |
GLE_0163 | GLE_4614 | Hypothetical protein. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.720 |
GLE_0163 | GLE_5067 | Hypothetical protein. | F5/8 type C domain protein. | 0.547 |
GLE_0163 | GLE_5161 | Hypothetical protein. | Beta-hexosaminidase. | 0.417 |
GLE_0867 | GLE_0163 | Hypothetical protein. | Hypothetical protein. | 0.555 |
GLE_0867 | GLE_1212 | Hypothetical protein. | FAD dependent oxidoreductase. | 0.442 |
GLE_0867 | GLE_1213 | Hypothetical protein. | Membrane protein. | 0.600 |
GLE_0867 | GLE_2271 | Hypothetical protein. | Beta-hexosaminidase. | 0.572 |
GLE_0867 | GLE_2606 | Hypothetical protein. | Hypothetical protein. | 0.542 |
GLE_0867 | GLE_2857 | Hypothetical protein. | Lipolytic enzyme, G-D-S-L family. | 0.524 |
GLE_0867 | GLE_3955 | Hypothetical protein. | Membrane protein. | 0.460 |
GLE_0867 | GLE_4614 | Hypothetical protein. | Oxidoreductase family, NAD-binding Rossmann fold. | 0.725 |
GLE_0867 | GLE_5067 | Hypothetical protein. | F5/8 type C domain protein. | 0.619 |
GLE_0867 | GLE_5161 | Hypothetical protein. | Beta-hexosaminidase. | 0.530 |
GLE_1212 | GLE_0867 | FAD dependent oxidoreductase. | Hypothetical protein. | 0.442 |
GLE_1212 | GLE_1213 | FAD dependent oxidoreductase. | Membrane protein. | 0.894 |
GLE_1213 | GLE_0867 | Membrane protein. | Hypothetical protein. | 0.600 |
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