Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0084 | GLE_0879 | GLE_0084 | GLE_0879 | Hypothetical protein. | ABC transporter. | 0.450 |
GLE_0084 | GLE_3494 | GLE_0084 | GLE_3494 | Hypothetical protein. | ATPase, AAA family protein; Belongs to the AAA ATPase family. | 0.451 |
GLE_0877 | GLE_0878 | GLE_0877 | GLE_0878 | Hypothetical protein. | Hypothetical protein. | 0.773 |
GLE_0877 | GLE_0879 | GLE_0877 | GLE_0879 | Hypothetical protein. | ABC transporter. | 0.566 |
GLE_0878 | GLE_0877 | GLE_0878 | GLE_0877 | Hypothetical protein. | Hypothetical protein. | 0.773 |
GLE_0878 | GLE_0879 | GLE_0878 | GLE_0879 | Hypothetical protein. | ABC transporter. | 0.566 |
GLE_0879 | GLE_0084 | GLE_0879 | GLE_0084 | ABC transporter. | Hypothetical protein. | 0.450 |
GLE_0879 | GLE_0877 | GLE_0879 | GLE_0877 | ABC transporter. | Hypothetical protein. | 0.566 |
GLE_0879 | GLE_0878 | GLE_0879 | GLE_0878 | ABC transporter. | Hypothetical protein. | 0.566 |
GLE_0879 | GLE_3494 | GLE_0879 | GLE_3494 | ABC transporter. | ATPase, AAA family protein; Belongs to the AAA ATPase family. | 0.505 |
GLE_0879 | GLE_3571 | GLE_0879 | GLE_3571 | ABC transporter. | ABC transporter, ATP-binding protein/transmembrane region. | 0.562 |
GLE_0879 | GLE_3673 | GLE_0879 | GLE_3673 | ABC transporter. | ABC transporter, ATP-binding protein. | 0.457 |
GLE_0879 | GLE_4353 | GLE_0879 | GLE_4353 | ABC transporter. | Abc transporter protein. | 0.568 |
GLE_0879 | GLE_4894 | GLE_0879 | GLE_4894 | ABC transporter. | Amino acid adenylation domain protein. | 0.546 |
GLE_0879 | GLE_5357 | GLE_0879 | GLE_5357 | ABC transporter. | ABC transporter, ATP-binding protein. | 0.701 |
GLE_0879 | infB | GLE_0879 | GLE_2176 | ABC transporter. | Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily. | 0.454 |
GLE_3494 | GLE_0084 | GLE_3494 | GLE_0084 | ATPase, AAA family protein; Belongs to the AAA ATPase family. | Hypothetical protein. | 0.451 |
GLE_3494 | GLE_0879 | GLE_3494 | GLE_0879 | ATPase, AAA family protein; Belongs to the AAA ATPase family. | ABC transporter. | 0.505 |
GLE_3494 | GLE_3673 | GLE_3494 | GLE_3673 | ATPase, AAA family protein; Belongs to the AAA ATPase family. | ABC transporter, ATP-binding protein. | 0.587 |
GLE_3571 | GLE_0879 | GLE_3571 | GLE_0879 | ABC transporter, ATP-binding protein/transmembrane region. | ABC transporter. | 0.562 |
page 1 of 2