STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0879ABC transporter. (612 aa)    
Predicted Functional Partners:
GLE_5357
ABC transporter, ATP-binding protein.
 
  
 
0.701
GLE_4353
Abc transporter protein.
  
 
0.568
GLE_0877
Hypothetical protein.
       0.566
GLE_0878
Hypothetical protein.
       0.566
GLE_3571
ABC transporter, ATP-binding protein/transmembrane region.
  
 
0.562
GLE_4894
Amino acid adenylation domain protein.
  
 
 0.546
GLE_3494
ATPase, AAA family protein; Belongs to the AAA ATPase family.
 
  0.505
GLE_3673
ABC transporter, ATP-binding protein.
 
 
 
0.457
infB
Translation initiation factor IF-2; One of the essential components for the initiation of protein synthesis. Protects formylmethionyl-tRNA from spontaneous hydrolysis and promotes its binding to the 30S ribosomal subunits. Also involved in the hydrolysis of GTP during the formation of the 70S ribosomal complex; Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. IF-2 subfamily.
  
 
   0.454
GLE_0084
Hypothetical protein.
  
  0.450
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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