Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
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[Homology]
Score
pepQXaa-Pro dipeptidase; Splits dipeptides with a prolyl residue in the C-terminal position. (458 aa)    
Predicted Functional Partners:
GLE_0899
Hypothetical protein.
       0.697
pepA
Cytosol aminopeptidase family; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N- terminal amino acids from various peptides.
    
 
 0.669
pilZ
Type IV pilus assembly protein PilZ.
       0.601
plsB
Acyltransferase; Belongs to the GPAT/DAPAT family.
  
     0.548
GLE_0902
Hypothetical protein.
       0.545
GLE_1293
FAD dependent oxidoreductase.
  
  
  0.515
GLE_3582
Decarboxylase family protein.
 
     0.479
etfA
Electron transfer flavoprotein subunit alpha.
    
  0.469
GLE_1736
Hypothetical protein.
      0.443
GLE_5034
Thioesterase domain.
  
     0.428
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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