STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilNType IV pilus assembly protein. (282 aa)    
Predicted Functional Partners:
pilM
Type IV pilus assembly protein.
 
 0.999
pilO
Type IV assembly protein.
 
 
 0.999
pilP
Type IV assembly protein.
 
 
 0.999
pilQ
Type IV assembly protein.
 
 
 0.997
gspL
Fimbrial assembly protein.
  
 0.956
GLE_0354
Peptidoglycan-binding LysM.
  
 
   0.930
pilC
Type IV pilus assembly protein.
 
 
 
 0.899
pilB
Type IV pilus assembly protein.
 
 
 
 0.893
gspE
General secretory pathway protein E; Involved in a type II secretion system (T2SS, formerly general secretion pathway, GSP) for the export of proteins.
   
 
 0.881
pilZ-2
Type IV pilus assembly protein PilZ.
  
   
 0.809
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.