STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0952Peptidase, M56 family/TonB family C-terminal domain protein. (426 aa)    
Predicted Functional Partners:
GLE_0951
Transcriptional regulator, BlaI/MecI/CopY family.
 
  
  0.972
GLE_5022
TonB-dependent receptor.
  
   0.577
GLE_2759
Penicillinase repressor.
 
  
  0.569
cat2
4-hydroxybutyrate coenzyme A transferase.
       0.547
GLE_2532
TonB-dependent receptor.
  
   0.505
GLE_2329
Transporter, MotA/TolQ/ExbB proton channel family.
  
 
 0.481
GLE_1353
TonB-dependent receptor.
  
   0.474
GLE_4598
TonB-dependent receptor.
  
   0.468
GLE_4423
TonB-dependent receptor domain protein.
  
   0.467
GLE_4810
Amidohydrolase family protein.
 
 
   0.444
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (36%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.