Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0976Hypothetical protein. (458 aa)    
Predicted Functional Partners:
GLE_0975
Membrane protein.
 
  
 0.975
GLE_2740
Alpha-2-macroglobulin family N- region; Protects the bacterial cell from host peptidases.
  
    0.578
GLE_5000
Hypothetical protein.
  
    0.565
GLE_0362
CDP-Glycerol:Poly(glycerophosphate) glycerophosphotransferase.
  
     0.557
GLE_2235
Hypothetical protein.
  
     0.534
GLE_4944
Phytase precursor.
  
     0.523
GLE_3457
Peptidoglycan-binding LysM.
  
     0.513
GLE_5001
Hypothetical protein.
  
    0.498
GLE_2575
ImpE/SciE family protein.
   
    0.495
GLE_0350
RDD family.
  
     0.492
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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