STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_0982Acetyltransferase (GNAT) family. (208 aa)    
Predicted Functional Partners:
GLE_0087
Acetyltransferase, including N-acetylases of ribosomal protein.
 
   
 0.723
GLE_0995
Acetyltransferase (GNAT) family.
  
     0.703
gltB
Glutamine amidotransferases class-II/glutamate synthase.
   
 
 0.581
pyk
Pyruvate kinase; Belongs to the pyruvate kinase family.
   
   0.560
pheA
Chorismate mutase/prephenate dehydratase/ACT domain.
    
  0.549
GLE_0907
Glyoxalase.
 
      0.519
tkB
Transketolase.
    
  0.498
manA
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 2 family.
    
  0.477
rnc
Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.
   
    0.445
fadJ
Fatty acid oxidation complex subunit alpha.
    
  0.410
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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