STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1024Sensor histidine kinase. (445 aa)    
Predicted Functional Partners:
GLE_1023
Transcriptional regulatory protein, C terminal.
 
 0.987
rpaA
Transcriptional regulatory protein, C terminal - DNA-binding response regulator.
  
 0.936
GLE_0677
Dihydrolipoyl dehydrogenase.
   
 0.918
GLE_4902
Response regulator receiver domain protein.
 
 0.915
kdpE
KDP operon transcriptional regulatory protein KdpE.
  
 0.897
GLE_4780
Transcriptional regulatory protein, C terminal - DNA-binding response regulator.
  
  0.855
GLE_5368
Sensor histidine kinase.
 0.843
phoP
DNA-binding response regulator.
  
 0.832
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
  
  0.825
GLE_5310
Sensory box histidine kinase.
 
0.823
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.