Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_1038 | yncB | GLE_1038 | GLE_1039 | Transcriptional regulator, TetR family. | NADP-dependent oxidoreductase YncB. | 0.634 |
GLE_1867 | yncB | GLE_1867 | GLE_1039 | Phosphotransferase enzyme family protein. | NADP-dependent oxidoreductase YncB. | 0.422 |
GLE_2077 | yncB | GLE_2077 | GLE_1039 | Alcohol dehydrogenase, zinc-binding. | NADP-dependent oxidoreductase YncB. | 0.474 |
GLE_2348 | yncB | GLE_2348 | GLE_1039 | Phosphotransferase enzyme family. | NADP-dependent oxidoreductase YncB. | 0.400 |
dkgB | yncB | GLE_5346 | GLE_1039 | 2,5-diketo-d-gluconic acid reductase B. | NADP-dependent oxidoreductase YncB. | 0.489 |
yncB | GLE_1038 | GLE_1039 | GLE_1038 | NADP-dependent oxidoreductase YncB. | Transcriptional regulator, TetR family. | 0.634 |
yncB | GLE_1867 | GLE_1039 | GLE_1867 | NADP-dependent oxidoreductase YncB. | Phosphotransferase enzyme family protein. | 0.422 |
yncB | GLE_2077 | GLE_1039 | GLE_2077 | NADP-dependent oxidoreductase YncB. | Alcohol dehydrogenase, zinc-binding. | 0.474 |
yncB | GLE_2348 | GLE_1039 | GLE_2348 | NADP-dependent oxidoreductase YncB. | Phosphotransferase enzyme family. | 0.400 |
yncB | dkgB | GLE_1039 | GLE_5346 | NADP-dependent oxidoreductase YncB. | 2,5-diketo-d-gluconic acid reductase B. | 0.489 |