Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0057 | GLE_1052 | GLE_0057 | GLE_1052 | Endoribonuclease L-PSP family protein. | TonB-dependent receptor. | 0.400 |
GLE_1051 | GLE_1052 | GLE_1051 | GLE_1052 | PepSY-associated TM helix. | TonB-dependent receptor. | 0.862 |
GLE_1051 | GLE_1053 | GLE_1051 | GLE_1053 | PepSY-associated TM helix. | Hypothetical protein. | 0.504 |
GLE_1051 | GLE_2547 | GLE_1051 | GLE_2547 | PepSY-associated TM helix. | Sigma factor regulatory protein, FecR/PupR family. | 0.464 |
GLE_1051 | GLE_2865 | GLE_1051 | GLE_2865 | PepSY-associated TM helix. | TonB-dependent receptor. | 0.451 |
GLE_1051 | fpvA | GLE_1051 | GLE_2399 | PepSY-associated TM helix. | Ferripyoverdine receptor precursor. | 0.478 |
GLE_1052 | GLE_0057 | GLE_1052 | GLE_0057 | TonB-dependent receptor. | Endoribonuclease L-PSP family protein. | 0.400 |
GLE_1052 | GLE_1051 | GLE_1052 | GLE_1051 | TonB-dependent receptor. | PepSY-associated TM helix. | 0.862 |
GLE_1052 | GLE_1053 | GLE_1052 | GLE_1053 | TonB-dependent receptor. | Hypothetical protein. | 0.563 |
GLE_1052 | GLE_2547 | GLE_1052 | GLE_2547 | TonB-dependent receptor. | Sigma factor regulatory protein, FecR/PupR family. | 0.418 |
GLE_1052 | GLE_2865 | GLE_1052 | GLE_2865 | TonB-dependent receptor. | TonB-dependent receptor. | 0.492 |
GLE_1052 | GLE_4556 | GLE_1052 | GLE_4556 | TonB-dependent receptor. | TonB family domain protein. | 0.432 |
GLE_1052 | fpvA | GLE_1052 | GLE_2399 | TonB-dependent receptor. | Ferripyoverdine receptor precursor. | 0.446 |
GLE_1053 | GLE_1051 | GLE_1053 | GLE_1051 | Hypothetical protein. | PepSY-associated TM helix. | 0.504 |
GLE_1053 | GLE_1052 | GLE_1053 | GLE_1052 | Hypothetical protein. | TonB-dependent receptor. | 0.563 |
GLE_2547 | GLE_1051 | GLE_2547 | GLE_1051 | Sigma factor regulatory protein, FecR/PupR family. | PepSY-associated TM helix. | 0.464 |
GLE_2547 | GLE_1052 | GLE_2547 | GLE_1052 | Sigma factor regulatory protein, FecR/PupR family. | TonB-dependent receptor. | 0.418 |
GLE_2547 | GLE_2865 | GLE_2547 | GLE_2865 | Sigma factor regulatory protein, FecR/PupR family. | TonB-dependent receptor. | 0.497 |
GLE_2547 | fpvA | GLE_2547 | GLE_2399 | Sigma factor regulatory protein, FecR/PupR family. | Ferripyoverdine receptor precursor. | 0.867 |
GLE_2865 | GLE_1051 | GLE_2865 | GLE_1051 | TonB-dependent receptor. | PepSY-associated TM helix. | 0.451 |
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