Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1102Hypothetical protein. (315 aa)    
Predicted Functional Partners:
GLE_1100
RNA polymerase sigma-E factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.803
GLE_1101
Hypothetical protein.
       0.760
GLE_0701
Efflux transporter, RND family, MFP subunit; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
    0.598
GLE_2011
Zn-dependent enzyme from deacylase/carboxypeptidase superfamily.
  
     0.521
GLE_1266
Hypothetical protein.
  
     0.507
GLE_0836
Ion channel family protein.
  
 
   0.506
GLE_0698
Efflux ABC transporter, permease protein.
  
     0.501
GLE_1103
aspartyl/Asparaginyl beta-hydroxylase family.
       0.497
GLE_5295
Prolyl 4-hydroxylase, alpha subunit.
  
     0.473
pckA
Phosphoenolpyruvate carboxykinase; Catalyzes the conversion of oxaloacetate (OAA) to phosphoenolpyruvate (PEP), the rate-limiting step in the metabolic pathway that produces glucose from lactate and other precursors derived from the citric acid cycle; Belongs to the phosphoenolpyruvate carboxykinase [GTP] family.
       0.466
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: medium (52%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.