STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
chiA1Chitinase A. (684 aa)    
Predicted Functional Partners:
GLE_5161
Beta-hexosaminidase.
 
  
 0.946
GLE_2271
Beta-hexosaminidase.
 
  
 0.901
nagZ
Beta-hexosaminidase; Plays a role in peptidoglycan recycling by cleaving the terminal beta-1,4-linked N-acetylglucosamine (GlcNAc) from peptide- linked peptidoglycan fragments, giving rise to free GlcNAc, anhydro-N- acetylmuramic acid and anhydro-N-acetylmuramic acid-linked peptides. Belongs to the glycosyl hydrolase 3 family. NagZ subfamily.
     
 0.890
chiA2
Chitinase; Belongs to the glycosyl hydrolase 18 family.
 
 
0.865
GLE_4851
Chitin binding domain.
  
 0.834
GLE_2053
Endochitinase GH fam 19.
  
  
 0.794
GLE_4852
Chitin binding domain.
  
     0.770
GLE_4829
Peptidase, families S8 and S53.
   
 0.766
bgc
Beta-glucanase; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
  
 0.755
sprC
streptogrisin-C precursor.
  
    0.723
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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