STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
yagTXanthine dehydrogenase. (193 aa)    
Predicted Functional Partners:
GLE_1132
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain.
 
 0.999
GLE_4564
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein.
 
 0.972
GLE_1130
Gluconate 2-dehydrogenase cytochrome c subunit.
  
  0.937
GLE_4566
Xanthine dehydrogenase accessory factor.
 
  
 0.839
GLE_4567
Molybdopterin-guanine dinucleotide biosynthesis-like protein.
 
  
 0.813
cysN
Bifunctional enzyme CysN/cysC; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
 0.793
GLE_4565
2Fe-2S iron-sulfur cluster binding domain.
  
  
 
0.669
kmo-2
Kynurenine 3-monooxygenase; Catalyzes the hydroxylation of L-kynurenine (L-Kyn) to form 3-hydroxy-L-kynurenine (L-3OHKyn). Required for synthesis of quinolinic acid; Belongs to the aromatic-ring hydroxylase family. KMO subfamily.
   
 
  0.601
GLE_5449
adenosine/AMP deaminase.
    
  0.594
GLE_0924
Inosine-uridine preferring nucleoside hydrolase.
     
  0.591
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.