STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pilUType IV pilus assembly protein. (388 aa)    
Predicted Functional Partners:
pilC
Type IV pilus assembly protein.
 
   
 0.841
pilT
Type IV pilus assembly protein.
 
  
0.820
pilM
Type IV pilus assembly protein.
  
  
 0.815
pilD
Type IV prepilin-like proteins leader peptide-processing enzyme; Cleaves type-4 fimbrial leader sequence and methylates the N- terminal (generally Phe) residue.
  
   
 0.798
gspF
General secretion pathway protein F.
 
   
 0.783
pilN
Type IV pilus assembly protein.
  
  
 0.669
pilQ
Type IV assembly protein.
  
   
 0.659
pilO
Type IV assembly protein.
  
  
 0.640
pilP
Type IV assembly protein.
  
   
 0.634
GLE_0354
Peptidoglycan-binding LysM.
  
    0.569
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.