Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1299TonB-dependent receptor. (967 aa)    
Predicted Functional Partners:
GLE_0602
TonB-dependent receptor.
  
     0.769
GLE_3209
TonB-dependent receptor.
  
     0.757
GLE_2865
TonB-dependent receptor.
  
     0.749
GLE_1530
TonB-dependent receptor.
  
     0.744
GLE_3084
TonB-dependent receptor.
  
     0.732
GLE_0340
TonB-dependent receptor.
  
  
  0.731
GLE_1300
Dipeptidyl aminopeptidase/acylaminoacyl peptidase.
 
     0.715
GLE_4412
Peptidase, M28 family.
  
     0.710
GLE_4423
TonB-dependent receptor domain protein.
  
     0.702
GLE_5374
Methyltransferase type 11.
  
     0.694
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (16%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.