Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GLE_0270 | GLE_1324 | Peptidase. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.444 |
GLE_0270 | GLE_3636 | Peptidase. | Prolyl oligopeptidase family. | 0.559 |
GLE_0270 | GLE_3638 | Peptidase. | Amino acid/peptide transporter (Peptide:H+ symporter). | 0.440 |
GLE_0270 | GLE_4950 | Peptidase. | Dipeptidyl peptidase IV. | 0.540 |
GLE_0624 | GLE_1324 | Mucin-2 precursor. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.404 |
GLE_0693 | GLE_1324 | Histidine kinase. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.407 |
GLE_1324 | GLE_0270 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Peptidase. | 0.444 |
GLE_1324 | GLE_0624 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Mucin-2 precursor. | 0.404 |
GLE_1324 | GLE_0693 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Histidine kinase. | 0.407 |
GLE_1324 | GLE_2002 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Hypothetical protein. | 0.426 |
GLE_1324 | GLE_3110 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | POT family. | 0.425 |
GLE_1324 | GLE_3636 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Prolyl oligopeptidase family. | 0.633 |
GLE_1324 | GLE_3638 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Amino acid/peptide transporter (Peptide:H+ symporter). | 0.412 |
GLE_1324 | GLE_4950 | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | Dipeptidyl peptidase IV. | 0.591 |
GLE_2002 | GLE_1324 | Hypothetical protein. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.426 |
GLE_3110 | GLE_1324 | POT family. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.425 |
GLE_3636 | GLE_0270 | Prolyl oligopeptidase family. | Peptidase. | 0.559 |
GLE_3636 | GLE_1324 | Prolyl oligopeptidase family. | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.633 |
GLE_3638 | GLE_0270 | Amino acid/peptide transporter (Peptide:H+ symporter). | Peptidase. | 0.440 |
GLE_3638 | GLE_1324 | Amino acid/peptide transporter (Peptide:H+ symporter). | Hypothetical protein; Catalyzes the removal of dipeptides from the N-terminus of oligopeptides. | 0.412 |
page 1 of 2