STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutIImidazolonepropionase. (469 aa)    
Predicted Functional Partners:
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
 0.998
hutF
Formiminoglutamate deiminase.
 
  
 0.995
hutG
N-formylglutamate amidohydrolase.
  
 0.961
hutH
Histidine ammonia-lyase.
 
  
 0.937
GLE_1358
Renal dipeptidase.
       0.578
GLE_1242
Hypothetical protein.
 
   
 0.489
GLE_1816
N-ethylammeline chlorohydrolase.
    
 0.471
GLE_1357
Hypothetical protein.
       0.436
sdaA
L-serine ammonia-lyase; Belongs to the iron-sulfur dependent L-serine dehydratase family.
      
 0.407
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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