STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1467FAD dependent oxidoreductase. (432 aa)    
Predicted Functional Partners:
dadA
D-amino acid dehydrogenase small subunit.
  
  
 
0.925
GLE_4609
Pyridine nucleotide-disulfide oxidoreductase.
 
 0.919
GLE_4612
Proline racemase; Belongs to the proline racemase family.
 
  
 0.915
hppD
4-hydroxyphenylpyruvate dioxygenase SEQUENCING GAP.
   
 
  0.908
gor
Glutathione reductase.
  
 
  0.863
GLE_4608
Dihydrodipicolinate synthetase family; Belongs to the DapA family.
 
  
  0.786
alr
Alanine racemase; Catalyzes the interconversion of L-alanine and D-alanine. May also act on other amino acids; Belongs to the alanine racemase family.
  
  
 0.757
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
 0.738
hutG
N-formylglutamate amidohydrolase.
       0.713
GLE_4607
Aldehyde dehydrogenase (NAD) family protein.
  
 
  0.700
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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