STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hutGN-formylglutamate amidohydrolase. (269 aa)    
Predicted Functional Partners:
hutF
Formiminoglutamate deiminase.
 
 
 0.990
hutI
Imidazolonepropionase.
  
 0.961
gltB
Glutamine amidotransferases class-II/glutamate synthase.
     
 0.924
putA
Proline dehydrogenase; Oxidizes proline to glutamate for use as a carbon and nitrogen source; In the C-terminal section; belongs to the aldehyde dehydrogenase family.
     
 0.885
GLE_5061
L-asparagineamidohydrolase precursor.
    
  0.885
hutU
Urocanate hydratase; Catalyzes the conversion of urocanate to 4-imidazolone-5- propionate.
 
  
 0.824
mqo
Malate:quinone oxidoreductase.
    
  0.811
GLE_1470
Dipeptidyl peptidase IV/S9A/B/C peptidase domain protein.
       0.800
GLE_1472
Hypothetical protein.
       0.782
GLE_1467
FAD dependent oxidoreductase.
       0.713
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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