STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1495Two-component transcriptional regulator, LuxR family. (251 aa)    
Predicted Functional Partners:
GLE_2112
Transcriptional regulator, LuxR family.
  
0.556
bla
Metallo-beta-lactamase L1 (Beta-lactamase type II) (Penicillinase).
    
   0.522
GLE_3527
Metallo-beta-lactamase superfamily protein.
    
   0.522
GLE_3612
Metallo-beta-lactamase domain protein.
    
   0.522
surE
5'/3'-nucleotidase SurE; Nucleotidase that shows phosphatase activity on nucleoside 5'-monophosphates; Belongs to the SurE nucleotidase family.
       0.487
pcm
protein-L-isoaspartate O-methyltransferase; Catalyzes the methyl esterification of L-isoaspartyl residues in peptides and proteins that result from spontaneous decomposition of normal L-aspartyl and L-asparaginyl residues. It plays a role in the repair and/or degradation of damaged proteins.
       0.487
GLE_2794
Transcriptional regulator, TetR family.
  
     0.485
GLE_0004
luxR family regulatory protein.
   
 0.403
GLE_0159
Transcriptional regulator, LuxR family.
   
 0.403
GLE_0569
Two-component system response regulator, LuxR family.
   
 0.403
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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