STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1540Histidine kinase. (419 aa)    
Predicted Functional Partners:
GLE_1539
Response regulator receiver/LytTr DNA-binding domain protein.
 0.983
algR
Alginate biosynthesis regulatory protein.
 0.952
GLE_3080
Transcriptional regulator, LytR/AlgR family.
 
 0.871
GLE_2282
Sensory/regulatory protein RpfC.
 
      0.857
GLE_0647
Response regulAtor containing a LytTR DNA-binding domain.
 
     0.772
fimS
Two-component system sensor protein.
 
  
 
0.742
GLE_1538
Lipoprotein.
       0.446
GLE_3951
Response regulator receiver domain.
    
 0.426
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.