STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1555Hypothetical protein. (253 aa)    
Predicted Functional Partners:
tkB
Transketolase.
   
 0.972
GLE_1554
Von Willebrand factor, type A.
 
    0.964
GLE_1556
Hypothetical protein.
 
  0.963
GLE_0677
Dihydrolipoyl dehydrogenase.
  
 0.872
GLE_0865
Serine/threonine protein kinase protein family.
   
 0.773
GLE_1557
Membrane protein.
       0.761
prs
Ribose-phosphate pyrophosphokinase; Involved in the biosynthesis of the central metabolite phospho-alpha-D-ribosyl-1-pyrophosphate (PRPP) via the transfer of pyrophosphoryl group from ATP to 1-hydroxyl of ribose-5-phosphate (Rib- 5-P); Belongs to the ribose-phosphate pyrophosphokinase family. Class I subfamily.
    
 0.596
GLE_1767
Outer membrane autotransporter barrel domain protein.
  
     0.569
GLE_3267
Formyl transferase/enoyl-CoA hydratase/isomerase family protein.
  
   0.517
pdhB
Pyruvate dehydrogenase E1 component, beta subunit.
    
  0.515
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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