Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1604Hypothetical protein. (179 aa)    
Predicted Functional Partners:
rlmL
RNA methylase family; Specifically methylates the guanine in position 2445 (m2G2445) and the guanine in position 2069 (m7G2069) of 23S rRNA. Belongs to the methyltransferase superfamily. RlmKL family.
       0.842
GLE_1606
Hypothetical protein.
       0.649
GLE_2875
Hypothetical protein.
  
     0.620
GLE_0293
Hypothetical protein.
  
     0.613
GLE_1602
N-acetylmuramoyl-L-alanine amidase.
       0.525
GLE_1580
Hypothetical protein.
  
     0.519
GLE_0133
Hypothetical protein.
  
     0.493
gvcR
Glycine cleavage system transcriptional repressor.
  
     0.469
GLE_3406
Hypothetical protein.
  
     0.469
GLE_5181
YceI like family; Belongs to the UPF0312 family.
  
     0.464
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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