Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
opgHHypothetical protein; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs). (649 aa)    
Predicted Functional Partners:
GLE_1639
Periplasmic glucan biosynthesis protein, MdoG; Involved in the biosynthesis of osmoregulated periplasmic glucans (OPGs).
  
 0.973
opgD
Periplasmic glucan biosynthesis protein, MdoG; Probably involved in the control of the structural glucose backbone of osmoregulated periplasmic glucans (OPGs). Belongs to the OpgD/OpgG family.
  
 0.887
GLE_1638
Hypothetical protein.
       0.572
GLE_3728
Polyprenyl synthetase; Belongs to the FPP/GGPP synthase family.
      
 0.443
plsB
Acyltransferase; Belongs to the GPAT/DAPAT family.
   
 
 0.436
gltB
Glutamine amidotransferases class-II/glutamate synthase.
     
 0.416
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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