STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoRPhosphate regulon sensor kinase PhoR. (453 aa)    
Predicted Functional Partners:
phoB
Phosphate regulon transcriptional regulatory protein PhoB.
 0.999
ppx
Ppx/GppA phosphatase family; Belongs to the GppA/Ppx family.
 
   
 0.918
ppk
Polyphosphate kinase; Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP). Belongs to the polyphosphate kinase 1 (PPK1) family.
     
 0.898
GLE_1751
Diguanylate cyclase.
  
 0.894
GLE_0164
Sensory box histidine kinase.
  
0.867
GLE_0632
Sensory box histidine kinase.
  
0.866
GLE_1628
DNA-binding response regulator.
  0.857
rpaA
Transcriptional regulatory protein, C terminal - DNA-binding response regulator.
  0.854
phoP
DNA-binding response regulator.
 0.852
kdpE
KDP operon transcriptional regulatory protein KdpE.
  0.833
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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