STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_167340-residue yvtn family beta-propeller repeat protein. (335 aa)    
Predicted Functional Partners:
GLE_2622
Isochorismatase.
  
    0.934
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
  0.915
GLE_2607
Cytochrome C family protein.
 
 0.868
GLE_0918
Lipoprotein.
  
 0.846
GLE_4894
Amino acid adenylation domain protein.
  
    0.801
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP.
    
  0.788
GLE_2560
Amino acid adenylation domain protein.
  
    0.784
GLE_2404
Di-heme cytochrome c peroxidase family protein.
  
 
 0.767
pqqE
Coenzyme PQQ biosynthesis protein E; Catalyzes the cross-linking of a glutamate residue and a tyrosine residue in the PqqA protein as part of the biosynthesis of pyrroloquinoline quinone (PQQ).
 
  
 0.672
GLE_4250
Pyridoxal-phosphate dependent enzyme/CBS domain pair.
     
  0.662
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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