STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1682Hypothetical protein. (336 aa)    
Predicted Functional Partners:
GLE_1681
Transglutaminase domain protein.
  
 0.994
GLE_1683
Methanol dehydrogenase regulator.
 
  
 0.925
GLE_1680
Outer membrane lipoprotein, Slp family.
 
     0.862
pilV-2
Type IV pilus assembly protein.
  
     0.758
pilV
Type IV pilus assembly protein.
  
     0.750
pilN
Type IV pilus assembly protein.
  
     0.749
GLE_3580
Type IV pre-pilin like leader sequence.
  
     0.744
pilP
Type IV assembly protein.
 
     0.743
GLE_0354
Peptidoglycan-binding LysM.
  
     0.739
pilZ-2
Type IV pilus assembly protein PilZ.
 
     0.733
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.