recO protein (Lysobacter enzymogenes) - STRING interaction network

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Score

recO

DNA repair protein; Involved in DNA repair and RecF pathway recombination. (249 aa)

Predicted Functional Partners:

recR

0.971

era

0.936

GLE_3618

0.793

rnc

0.792

GLE_0237

0.692

GLE_1709

0.665

sspB

0.632

pdxJ

0.625

recF

0.612

ftsB

0.611

Your Current Organism:

Lysobacter enzymogenes

NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
GLE_0237	recO	GLE_0237	GLE_1712	Hypothetical protein.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.692
GLE_0237	sspB	GLE_0237	GLE_3596	Hypothetical protein.	Stringent starvation protein B.	0.443
GLE_1709	era	GLE_1709	GLE_1711	Hypothetical protein.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.481
GLE_1709	recO	GLE_1709	GLE_1712	Hypothetical protein.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.665
GLE_1709	rnc	GLE_1709	GLE_1710	Hypothetical protein.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.814
GLE_3618	era	GLE_3618	GLE_1711	ATP-binding protein.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.543
GLE_3618	recO	GLE_3618	GLE_1712	ATP-binding protein.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.793
era	GLE_1709	GLE_1711	GLE_1709	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Hypothetical protein.	0.481
era	GLE_3618	GLE_1711	GLE_3618	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	ATP-binding protein.	0.543
era	pdxJ	GLE_1711	GLE_5323	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Pyridoxal phosphate biosynthesis protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	0.682
era	recO	GLE_1711	GLE_1712	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.936
era	rnc	GLE_1711	GLE_1710	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	Ribonuclease III; Digests double-stranded RNA. Involved in the processing of primary rRNA transcript to yield the immediate precursors to the large and small rRNAs (23S and 16S). Processes some mRNAs, and tRNAs when they are encoded in the rRNA operon. Processes pre-crRNA and tracrRNA of type II CRISPR loci if present in the organism.	0.979
ftsB	recO	GLE_1489	GLE_1712	Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.611
ftsB	sspB	GLE_1489	GLE_3596	Septum formation initiator; Essential cell division protein. May link together the upstream cell division proteins, which are predominantly cytoplasmic, with the downstream cell division proteins, which are predominantly periplasmic.	Stringent starvation protein B.	0.772
pdxJ	era	GLE_5323	GLE_1711	Pyridoxal phosphate biosynthesis protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	GTP-binding protein Era; An essential GTPase that binds both GDP and GTP, with rapid nucleotide exchange. Plays a role in 16S rRNA processing and 30S ribosomal subunit biogenesis and possibly also in cell cycle regulation and energy metabolism.	0.682
pdxJ	recO	GLE_5323	GLE_1712	Pyridoxal phosphate biosynthesis protein PdxJ; Catalyzes the complicated ring closure reaction between the two acyclic compounds 1-deoxy-D-xylulose-5-phosphate (DXP) and 3-amino- 2-oxopropyl phosphate (1-amino-acetone-3-phosphate or AAP) to form pyridoxine 5'-phosphate (PNP) and inorganic phosphate.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.625
recF	recO	GLE_5337	GLE_1712	Recombination protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	0.612
recF	recR	GLE_5337	GLE_1678	Recombination protein; The RecF protein is involved in DNA metabolism; it is required for DNA replication and normal SOS inducibility. RecF binds preferentially to single-stranded, linear DNA. It also seems to bind ATP; Belongs to the RecF family.	Recombination protein; May play a role in DNA repair. It seems to be involved in an RecBC-independent recombinational process of DNA repair. It may act with RecF and RecO.	0.816
recO	GLE_0237	GLE_1712	GLE_0237	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	Hypothetical protein.	0.692
recO	GLE_1709	GLE_1712	GLE_1709	DNA repair protein; Involved in DNA repair and RecF pathway recombination.	Hypothetical protein.	0.665