Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GLE_1767Outer membrane autotransporter barrel domain protein. (1410 aa)    
Predicted Functional Partners:
GLE_4072
Transporter, monovalent cation:proton antiporter-2 (CPA2) family.
  
     0.755
GLE_2536
Glycosyl hydrolase, family 9.
  
     0.736
GLE_4707
N-acetylmuramoyl-L-alanine amidase.
  
     0.736
GLE_2532
TonB-dependent receptor.
  
     0.693
GLE_4706
SpoIID/LytB domain protein.
  
     0.688
GLE_4424
Hypothetical protein.
  
     0.683
GLE_1556
Hypothetical protein.
  
    0.656
GLE_3850
Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family.
    
 0.630
GLE_3644
Hypothetical protein.
  
     0.629
GLE_3653
TonB-dependent receptor.
  
 
   0.606
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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