Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_1873 | GLE_3841 | GLE_1873 | GLE_3841 | Hypothetical protein. | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | 0.432 |
GLE_1873 | GLE_3843 | GLE_1873 | GLE_3843 | Hypothetical protein. | Protease 1. | 0.432 |
GLE_1873 | GLE_3850 | GLE_1873 | GLE_3850 | Hypothetical protein. | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.656 |
GLE_1873 | GLE_3852 | GLE_1873 | GLE_3852 | Hypothetical protein. | Peptidase, families S8 and S53/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.513 |
GLE_1873 | nprV-2 | GLE_1873 | GLE_2743 | Hypothetical protein. | Neutral protease; Extracellular zinc metalloprotease. | 0.427 |
GLE_3841 | GLE_1873 | GLE_3841 | GLE_1873 | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | Hypothetical protein. | 0.432 |
GLE_3841 | GLE_3843 | GLE_3841 | GLE_3843 | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | Protease 1. | 0.647 |
GLE_3841 | GLE_3850 | GLE_3841 | GLE_3850 | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.719 |
GLE_3841 | GLE_3852 | GLE_3841 | GLE_3852 | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | Peptidase, families S8 and S53/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.587 |
GLE_3841 | nprV-2 | GLE_3841 | GLE_2743 | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | Neutral protease; Extracellular zinc metalloprotease. | 0.503 |
GLE_3843 | GLE_1873 | GLE_3843 | GLE_1873 | Protease 1. | Hypothetical protein. | 0.432 |
GLE_3843 | GLE_3841 | GLE_3843 | GLE_3841 | Protease 1. | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | 0.647 |
GLE_3843 | GLE_3850 | GLE_3843 | GLE_3850 | Protease 1. | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.719 |
GLE_3843 | GLE_3852 | GLE_3843 | GLE_3852 | Protease 1. | Peptidase, families S8 and S53/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.587 |
GLE_3843 | nprV-2 | GLE_3843 | GLE_2743 | Protease 1. | Neutral protease; Extracellular zinc metalloprotease. | 0.502 |
GLE_3850 | GLE_1873 | GLE_3850 | GLE_1873 | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | Hypothetical protein. | 0.656 |
GLE_3850 | GLE_3841 | GLE_3850 | GLE_3841 | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | Protease 1; Highly specific endopeptidase that hydrolyzes lysyl bonds including the Lys-Pro bond; Belongs to the peptidase S1 family. | 0.719 |
GLE_3850 | GLE_3843 | GLE_3850 | GLE_3843 | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | Protease 1. | 0.719 |
GLE_3850 | GLE_3852 | GLE_3850 | GLE_3852 | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | Peptidase, families S8 and S53/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | 0.801 |
GLE_3850 | nprV-2 | GLE_3850 | GLE_2743 | Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family. | Neutral protease; Extracellular zinc metalloprotease. | 0.716 |
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