STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1876Glycosyl transferase, group 2 family protein. (496 aa)    
Predicted Functional Partners:
GLE_1877
Polysaccharide deacetylase.
 
 0.924
GLE_1870
Biofilm PGA synthesis lipoprotein PgaB.
 
 
 0.742
bgc
Beta-glucanase; Belongs to the glycosyl hydrolase 8 (cellulase D) family.
 
 
 0.669
GLE_1812
Sensory box-containing diguanylate cyclase/cyclic diguanylate phosphodiesterase.
  
 
 0.651
GLE_4794
Polysaccharide deacetylase.
 
 
 0.614
GLE_3348
Polysaccharide deacetylase.
 
 
 0.570
ugd
Udp-glucose 6-dehydrogenase.
  
 
 0.525
GLE_2255
UDP-N-acetylglucosamine 2-epimerase; Belongs to the UDP-N-acetylglucosamine 2-epimerase family.
    
 0.507
GLE_4436
Sulfotransferase.
  
 
   0.507
epsB
Tyrosine-protein kinase.
 
   
 0.492
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.