Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0677 | GLE_1879 | GLE_0677 | GLE_1879 | Dihydrolipoyl dehydrogenase. | Dyp-type peroxidase family protein. | 0.518 |
GLE_0677 | pheA | GLE_0677 | GLE_2983 | Dihydrolipoyl dehydrogenase. | Chorismate mutase/prephenate dehydratase/ACT domain. | 0.516 |
GLE_1878 | GLE_1879 | GLE_1878 | GLE_1879 | Hypothetical protein. | Dyp-type peroxidase family protein. | 0.497 |
GLE_1879 | GLE_0677 | GLE_1879 | GLE_0677 | Dyp-type peroxidase family protein. | Dihydrolipoyl dehydrogenase. | 0.518 |
GLE_1879 | GLE_1878 | GLE_1879 | GLE_1878 | Dyp-type peroxidase family protein. | Hypothetical protein. | 0.497 |
GLE_1879 | GLE_1928 | GLE_1879 | GLE_1928 | Dyp-type peroxidase family protein. | 3-hydroxyacyl-coa dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.501 |
GLE_1879 | GLE_2369 | GLE_1879 | GLE_2369 | Dyp-type peroxidase family protein. | Esterase/lipase/thioesterase domain-containing protein. | 0.487 |
GLE_1879 | GLE_3300 | GLE_1879 | GLE_3300 | Dyp-type peroxidase family protein. | Hypothetical protein. | 0.658 |
GLE_1879 | GLE_5127 | GLE_1879 | GLE_5127 | Dyp-type peroxidase family protein. | Hypothetical protein. | 0.658 |
GLE_1879 | pheA | GLE_1879 | GLE_2983 | Dyp-type peroxidase family protein. | Chorismate mutase/prephenate dehydratase/ACT domain. | 0.436 |
GLE_1879 | rumA | GLE_1879 | GLE_1716 | Dyp-type peroxidase family protein. | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | 0.526 |
GLE_1928 | GLE_1879 | GLE_1928 | GLE_1879 | 3-hydroxyacyl-coa dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | Dyp-type peroxidase family protein. | 0.501 |
GLE_2369 | GLE_1879 | GLE_2369 | GLE_1879 | Esterase/lipase/thioesterase domain-containing protein. | Dyp-type peroxidase family protein. | 0.487 |
GLE_2369 | pheA | GLE_2369 | GLE_2983 | Esterase/lipase/thioesterase domain-containing protein. | Chorismate mutase/prephenate dehydratase/ACT domain. | 0.447 |
GLE_3300 | GLE_1879 | GLE_3300 | GLE_1879 | Hypothetical protein. | Dyp-type peroxidase family protein. | 0.658 |
GLE_5127 | GLE_1879 | GLE_5127 | GLE_1879 | Hypothetical protein. | Dyp-type peroxidase family protein. | 0.658 |
pheA | GLE_0677 | GLE_2983 | GLE_0677 | Chorismate mutase/prephenate dehydratase/ACT domain. | Dihydrolipoyl dehydrogenase. | 0.516 |
pheA | GLE_1879 | GLE_2983 | GLE_1879 | Chorismate mutase/prephenate dehydratase/ACT domain. | Dyp-type peroxidase family protein. | 0.436 |
pheA | GLE_2369 | GLE_2983 | GLE_2369 | Chorismate mutase/prephenate dehydratase/ACT domain. | Esterase/lipase/thioesterase domain-containing protein. | 0.447 |
rumA | GLE_1879 | GLE_1716 | GLE_1879 | 23S rRNA (uracil-5-)-methyltransferase RumA; Catalyzes the formation of 5-methyl-uridine at position 1939 (m5U1939) in 23S rRNA; Belongs to the class I-like SAM-binding methyltransferase superfamily. RNA M5U methyltransferase family. RlmD subfamily. | Dyp-type peroxidase family protein. | 0.526 |