STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_19283-hydroxyacyl-coa dehydrogenase type II; Belongs to the short-chain dehydrogenases/reductases (SDR) family. (256 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
  
 0.737
gltB
Glutamine amidotransferases class-II/glutamate synthase.
     
 0.726
yeiP
Elongation factor P-like protein.
   
   0.718
hisD
Histidinol dehydrogenase; Catalyzes the sequential NAD-dependent oxidations of L- histidinol to L-histidinaldehyde and then to L-histidine.
 
      0.664
GLE_2622
Isochorismatase.
  
 
 0.657
GLE_2995
NAD dependent epimerase/dehydratase family.
 
 
 0.631
GLE_3067
Oxidoreductase.
   
 0.582
GLE_4392
Oxidoreductase.
   
 0.582
GLE_1293
FAD dependent oxidoreductase.
 
  
 0.553
GLE_1967
methylcrotonoyl-CoA carboxylase.
  
  0.543
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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