STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_1936Glycosyltransferase family 28 N-terminal domain. (405 aa)    
Predicted Functional Partners:
GLE_2797
Cytochrome P450 family protein.
 
 0.920
GLE_4605
Platelet-activating factor acetylhydrolase, plasma/intracellular isoform II.
  
    0.612
GLE_0494
Ricin type lectin domain protein.
  
     0.575
GLE_4212
Serine/threonine protein kinase.
  
     0.573
GLE_3479
Peptidase, families S8 and S53.
  
     0.563
GLE_3017
Von Willebrand factor, type A.
  
     0.557
phoA
Alkaline phosphatase precursor.
  
     0.548
GLE_4894
Amino acid adenylation domain protein.
  
  
 0.514
tcmP
Tetracenomycin polyketide synthesis O-methyltransferase TcmP.
  
  
  0.505
GLE_1937
Hypothetical protein.
       0.483
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.