Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0160 | GLE_1966 | GLE_0160 | GLE_1966 | Hypothetical protein. | dnaK family protein; Belongs to the heat shock protein 70 family. | 0.918 |
GLE_0160 | GLE_2262 | GLE_0160 | GLE_2262 | Hypothetical protein. | Hsp90xo protein. | 0.964 |
GLE_0160 | groL | GLE_0160 | GLE_0784 | Hypothetical protein. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.761 |
GLE_0160 | groS | GLE_0160 | GLE_0783 | Hypothetical protein. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.622 |
GLE_0160 | grpE | GLE_0160 | GLE_2231 | Hypothetical protein. | Co-chaperone GrpE; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins, in association with DnaK and GrpE. It is the nucleotide exchange factor for DnaK and may function as a thermosensor. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-depend [...] | 0.858 |
GLE_0160 | rplP | GLE_0160 | GLE_3783 | Hypothetical protein. | Ribosomal protein L16; Binds 23S rRNA and is also seen to make contacts with the A and possibly P site tRNAs; Belongs to the universal ribosomal protein uL16 family. | 0.729 |
GLE_1964 | GLE_1965 | GLE_1964 | GLE_1965 | dnaJ domain. | dnaJ domain. | 0.893 |
GLE_1964 | GLE_1966 | GLE_1964 | GLE_1966 | dnaJ domain. | dnaK family protein; Belongs to the heat shock protein 70 family. | 0.955 |
GLE_1964 | GLE_2262 | GLE_1964 | GLE_2262 | dnaJ domain. | Hsp90xo protein. | 0.767 |
GLE_1965 | GLE_1964 | GLE_1965 | GLE_1964 | dnaJ domain. | dnaJ domain. | 0.893 |
GLE_1965 | GLE_1966 | GLE_1965 | GLE_1966 | dnaJ domain. | dnaK family protein; Belongs to the heat shock protein 70 family. | 0.929 |
GLE_1965 | GLE_2262 | GLE_1965 | GLE_2262 | dnaJ domain. | Hsp90xo protein. | 0.437 |
GLE_1966 | GLE_0160 | GLE_1966 | GLE_0160 | dnaK family protein; Belongs to the heat shock protein 70 family. | Hypothetical protein. | 0.918 |
GLE_1966 | GLE_1964 | GLE_1966 | GLE_1964 | dnaK family protein; Belongs to the heat shock protein 70 family. | dnaJ domain. | 0.955 |
GLE_1966 | GLE_1965 | GLE_1966 | GLE_1965 | dnaK family protein; Belongs to the heat shock protein 70 family. | dnaJ domain. | 0.929 |
GLE_1966 | GLE_2262 | GLE_1966 | GLE_2262 | dnaK family protein; Belongs to the heat shock protein 70 family. | Hsp90xo protein. | 0.990 |
GLE_1966 | GLE_2731 | GLE_1966 | GLE_2731 | dnaK family protein; Belongs to the heat shock protein 70 family. | dnaJ domain. | 0.975 |
GLE_1966 | dnaJ | GLE_1966 | GLE_2233 | dnaK family protein; Belongs to the heat shock protein 70 family. | Chaperone protein dnaJ; Participates actively in the response to hyperosmotic and heat shock by preventing the aggregation of stress-denatured proteins and by disaggregating proteins, also in an autonomous, DnaK-independent fashion. Unfolded proteins bind initially to DnaJ; upon interaction with the DnaJ-bound protein, DnaK hydrolyzes its bound ATP, resulting in the formation of a stable complex. GrpE releases ADP from DnaK; ATP binding to DnaK triggers the release of the substrate protein, thus completing the reaction cycle. Several rounds of ATP-dependent interactions between DnaJ, D [...] | 0.997 |
GLE_1966 | groL | GLE_1966 | GLE_0784 | dnaK family protein; Belongs to the heat shock protein 70 family. | 60 kDa chaperonin; Prevents misfolding and promotes the refolding and proper assembly of unfolded polypeptides generated under stress conditions. | 0.938 |
GLE_1966 | groS | GLE_1966 | GLE_0783 | dnaK family protein; Belongs to the heat shock protein 70 family. | Chaperonin GroS; Binds to Cpn60 in the presence of Mg-ATP and suppresses the ATPase activity of the latter. | 0.870 |
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