Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
ampRHTH-type transcriptional activator AmpR; Belongs to the LysR transcriptional regulatory family. (290 aa)    
Predicted Functional Partners:
GLE_2409
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.698
GLE_4909
Transcriptional regulator, LysR-family; Belongs to the LysR transcriptional regulatory family.
  
     0.670
GLE_1232
HTH-type transcriptional regulator CysB; Belongs to the LysR transcriptional regulatory family.
  
     0.637
GLE_4773
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.533
oxyR
Transcriptional regulator, LysR family/LysR substrate binding domain; Belongs to the LysR transcriptional regulatory family.
  
   
 0.488
GLE_2036
Hypothetical protein.
       0.456
mltB
Lytic murein transglycosylase B.
      
 0.444
purB-2
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.419
purB
Adenylosuccinate lyase; Belongs to the lyase 1 family. Adenylosuccinate lyase subfamily.
      
 0.419
tetR
Tetracyclin repressor.
    
 
 0.417
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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