Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
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[Homology]
Score
GLE_2063Peptidase, families S8 and S53. (722 aa)    
Predicted Functional Partners:
GLE_3839
Zinc carboxypeptidase/PKD domain/proprotein convertase P-domain protein.
  
     0.655
GLE_0632
Sensory box histidine kinase.
    
 0.577
GLE_2062
Hypothetical protein.
       0.572
GLE_2637
Subtilisin N-terminal region/peptidase, families S8 and S53; Belongs to the peptidase S8 family.
  
 
   0.569
ribB
3,4-dihydroxy-2-butanone 4-phosphate synthase; Catalyzes the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2-butanone 4-phosphate; Belongs to the DHBP synthase family.
  
 
 0.555
GLE_3854
Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family.
  
 
   0.539
GLE_1993
Peptidase, families S8 and S53.
  
 
   0.525
GLE_1209
Tetratricopeptide repeat domain protein.
  
     0.484
GLE_3522
Aminotransferase class-III; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
     0.452
GLE_3843
Protease 1.
  
     0.417
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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