Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GLE_0667 | GLE_2153 | GLE_0667 | GLE_2153 | Alcohol dehydrogenase, zinc-containing. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.438 |
GLE_0667 | GLE_2797 | GLE_0667 | GLE_2797 | Alcohol dehydrogenase, zinc-containing. | Cytochrome P450 family protein. | 0.545 |
GLE_2151 | GLE_2153 | GLE_2151 | GLE_2153 | Hypothetical protein. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.412 |
GLE_2153 | GLE_0667 | GLE_2153 | GLE_0667 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Alcohol dehydrogenase, zinc-containing. | 0.438 |
GLE_2153 | GLE_2151 | GLE_2153 | GLE_2151 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Hypothetical protein. | 0.412 |
GLE_2153 | GLE_2560 | GLE_2153 | GLE_2560 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Amino acid adenylation domain protein. | 0.625 |
GLE_2153 | GLE_2797 | GLE_2153 | GLE_2797 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Cytochrome P450 family protein. | 0.512 |
GLE_2153 | GLE_3761 | GLE_2153 | GLE_3761 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Amidase. | 0.429 |
GLE_2153 | GLE_4861 | GLE_2153 | GLE_4861 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Hypothetical protein. | 0.474 |
GLE_2153 | GLE_4894 | GLE_2153 | GLE_4894 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Amino acid adenylation domain protein. | 0.760 |
GLE_2153 | accD | GLE_2153 | GLE_2149 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | acetyl-CoA carboxylase, carboxyl transferase, beta subunit; Component of the acetyl coenzyme A carboxylase (ACC) complex. Biotin carboxylase (BC) catalyzes the carboxylation of biotin on its carrier protein (BCCP) and then the CO(2) group is transferred by the transcarboxylase to acetyl-CoA to form malonyl-CoA; Belongs to the AccD/PCCB family. | 0.474 |
GLE_2153 | flgF | GLE_2153 | GLE_4628 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Flagellar basal-body rod protein. | 0.581 |
GLE_2153 | glmM | GLE_2153 | GLE_2150 | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | Phosphoglucosamine mutase; Catalyzes the conversion of glucosamine-6-phosphate to glucosamine-1-phosphate; Belongs to the phosphohexose mutase family. | 0.474 |
GLE_2560 | GLE_2153 | GLE_2560 | GLE_2153 | Amino acid adenylation domain protein. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.625 |
GLE_2560 | GLE_2797 | GLE_2560 | GLE_2797 | Amino acid adenylation domain protein. | Cytochrome P450 family protein. | 0.999 |
GLE_2560 | GLE_4894 | GLE_2560 | GLE_4894 | Amino acid adenylation domain protein. | Amino acid adenylation domain protein. | 0.999 |
GLE_2797 | GLE_0667 | GLE_2797 | GLE_0667 | Cytochrome P450 family protein. | Alcohol dehydrogenase, zinc-containing. | 0.545 |
GLE_2797 | GLE_2153 | GLE_2797 | GLE_2153 | Cytochrome P450 family protein. | Oxidoreductase; Belongs to the iron/ascorbate-dependent oxidoreductase family. | 0.512 |
GLE_2797 | GLE_2560 | GLE_2797 | GLE_2560 | Cytochrome P450 family protein. | Amino acid adenylation domain protein. | 0.999 |
GLE_2797 | GLE_3761 | GLE_2797 | GLE_3761 | Cytochrome P450 family protein. | Amidase. | 0.522 |
page 1 of 2