STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2194Alcohol dehydrogenase. (343 aa)    
Predicted Functional Partners:
GLE_4894
Amino acid adenylation domain protein.
  
 
 0.742
fadJ
Fatty acid oxidation complex subunit alpha.
  
 0.585
fadB
3-hydroxyacyl-CoA dehydrogenase.
  
 0.585
GLE_0667
Alcohol dehydrogenase, zinc-containing.
 
 
0.567
GLE_4842
S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase; Belongs to the zinc-containing alcohol dehydrogenase family. Class-III subfamily.
  
  
0.537
ycaN
HTH-type transcriptional regulator YcaN; Belongs to the LysR transcriptional regulatory family.
       0.522
GLE_2560
Amino acid adenylation domain protein.
  
 
 0.518
maeB
NADP-dependent malic enzyme.
    
 0.474
glpK
Glycerol kinase; Key enzyme in the regulation of glycerol uptake and metabolism. Catalyzes the phosphorylation of glycerol to yield sn- glycerol 3-phosphate; Belongs to the FGGY kinase family.
    
 0.466
GLE_1885
Malonyl CoA-acyl carrier protein transacylase.
   
 0.466
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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