STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2199TonB-dependent receptor. (932 aa)    
Predicted Functional Partners:
GLE_0919
TonB-dependent receptor.
  
 
  0.727
GLE_1431
Hypothetical protein.
  
     0.692
GLE_2382
TonB dependent receptor.
  
     0.683
GLE_3084
TonB-dependent receptor.
  
 
  0.617
GLE_2622
Isochorismatase.
  
  
 0.609
GLE_4417
NHL repeat protein.
  
 
   0.604
GLE_1345
TonB-dependent receptor.
  
 
  0.595
GLE_1203
TonB-dependent receptor.
  
    0.594
GLE_2198
Hypothetical protein.
       0.559
GLE_5208
Peptidase, M61 (glycyl aminopeptidase) family.
  
     0.540
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.