STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2234Gram-negative bacterial tonB protein. (157 aa)    
Predicted Functional Partners:
GLE_3343
Lipoprotein.
  
 
   0.743
GLE_4994
Immunogenic 75 kDa protein PG4.
  
 
   0.693
GLE_4802
AMP nucleosidase.
  
     0.676
GLE_3630
Membrane protein.
  
     0.519
GLE_3584
Oar protein.
  
   0.490
metG
methionyl-tRNA synthetase; Is required not only for elongation of protein synthesis but also for the initiation of all mRNA translation through initiator tRNA(fMet) aminoacylation.
 
  
  0.470
GLE_2329
Transporter, MotA/TolQ/ExbB proton channel family.
  
 
 0.468
GLE_2330
Transport energizing protein, ExbD/TolR family.
   
   0.437
exbD
TonB system transport protein exbD.
   
   0.437
GLE_3034
Transport energizing protein, ExbD/TolR family.
   
   0.437
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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