Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
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[Homology]
Score
GLE_2284long-chain-fatty-acid--CoA ligase. (558 aa)    
Predicted Functional Partners:
aas
2-acylglycerophosphoethanolamine acyltransferase.
 
 
  0.939
GLE_3552
acyl-CoA dehydrogenase.
  
 
  0.754
GLE_4894
Amino acid adenylation domain protein.
  
 0.749
GLE_1691
Malonyl CoA-acyl carrier protein transacylase.
 
   
  0.721
rpfF
Enoyl-CoA hydratase/isomerase family RpfF.
  
 0.631
GLE_2995
NAD dependent epimerase/dehydratase family.
   
 0.623
GLE_2282
Sensory/regulatory protein RpfC.
     
 0.596
GLE_1096
acyl-CoA dehydrogenase, C-terminal domain.
  
 
  0.589
GLE_2285
Hypothetical protein.
       0.572
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3-phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate.
 
   
  0.557
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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