STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
trxBThioredoxin-disulfide reductase. (317 aa)    
Predicted Functional Partners:
trx
Thioredoxin; Belongs to the thioredoxin family.
 
 0.992
GLE_3886
Peroxiredoxin.
  
 
 0.955
sufS
Cysteine desulfurase; Catalyzes the removal of elemental sulfur and selenium atoms from L-cysteine, L-cystine, L-selenocysteine, and L-selenocystine to produce L-alanine.
 
 
  0.924
mdeA
Methionine gamma-lyase.
   
 
 0.906
GLE_0615
Hypothetical protein.
  
 0.905
gltB
Glutamine amidotransferases class-II/glutamate synthase.
    
 0.821
GLE_2316
Hypothetical protein.
       0.773
GLE_3067
Oxidoreductase.
   
 
 0.751
GLE_4392
Oxidoreductase.
   
 
 0.751
GLE_2901
Molybdopterin biosynthesis protein.
  
 
 0.750
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.