STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2335Filamentous hemagglutinin family outer membrane protein. (3996 aa)    
Predicted Functional Partners:
GLE_2328
Hemolysin activation/secretion protein family.
 
 0.884
GLE_2332
Hypothetical protein.
 
    0.859
GLE_2329
Transporter, MotA/TolQ/ExbB proton channel family.
 
    0.846
GLE_2331
TonB family C-terminal domain.
 
     0.836
GLE_2330
Transport energizing protein, ExbD/TolR family.
 
     0.776
GLE_2336
Hypothetical protein.
       0.773
GLE_3988
POTRA domain, ShlB-type.
 
 0.594
GLE_2334
Hypothetical protein.
       0.523
GLE_4579
Peptidase, families S8 and S53/outer membrane autotransporter barrel domain.
 
 
 0.520
GLE_3850
Peptidase, families S8 and S53/PKD domain/proprotein convertase P-domain protein; Belongs to the peptidase S8 family.
 
 
 0.519
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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