STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GLE_2345Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. (308 aa)    
Predicted Functional Partners:
GLE_2349
Phosphoglycerate mutase family protein.
 
     0.746
GLE_2350
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.660
GLE_2348
Phosphotransferase enzyme family.
 
    0.657
GLE_2346
acyl-CoA dehydrogenase.
 
     0.634
GLE_2347
Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
 
     0.619
GLE_4774
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.549
GLE_1408
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.470
GLE_4570
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.456
GLE_1232
HTH-type transcriptional regulator CysB; Belongs to the LysR transcriptional regulatory family.
  
     0.427
GLE_2975
Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family.
  
     0.418
Your Current Organism:
Lysobacter enzymogenes
NCBI taxonomy Id: 69
Other names: ATCC 29487, DSM 2043, L. enzymogenes, LMG 8762, LMG:8762, Lysobacter enzymogenes subsp. enzymogenes, UASM 495
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.