Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 annotation | node2 annotation | score |
GLE_1095 | GLE_1867 | Hypothetical protein. | Phosphotransferase enzyme family protein. | 0.489 |
GLE_1095 | GLE_2347 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.566 |
GLE_1095 | GLE_2348 | Hypothetical protein. | Phosphotransferase enzyme family. | 0.523 |
GLE_1095 | GLE_2349 | Hypothetical protein. | Phosphoglycerate mutase family protein. | 0.645 |
GLE_1095 | GLE_2350 | Hypothetical protein. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.715 |
GLE_1095 | GLE_4393 | Hypothetical protein. | Transcriptional regulator, TetR family. | 0.572 |
GLE_1867 | GLE_1095 | Phosphotransferase enzyme family protein. | Hypothetical protein. | 0.489 |
GLE_1867 | GLE_2346 | Phosphotransferase enzyme family protein. | acyl-CoA dehydrogenase. | 0.982 |
GLE_1867 | GLE_2347 | Phosphotransferase enzyme family protein. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.647 |
GLE_1867 | GLE_2349 | Phosphotransferase enzyme family protein. | Phosphoglycerate mutase family protein. | 0.789 |
GLE_1867 | GLE_2350 | Phosphotransferase enzyme family protein. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.626 |
GLE_2248 | GLE_2349 | Oxidoreductase, zinc-binding dehydrogenase family/NAD-binding Rossmann fold. | Phosphoglycerate mutase family protein. | 0.535 |
GLE_2345 | GLE_2346 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | acyl-CoA dehydrogenase. | 0.634 |
GLE_2345 | GLE_2347 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.619 |
GLE_2345 | GLE_2348 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Phosphotransferase enzyme family. | 0.657 |
GLE_2345 | GLE_2349 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Phosphoglycerate mutase family protein. | 0.746 |
GLE_2345 | GLE_2350 | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.660 |
GLE_2346 | GLE_1867 | acyl-CoA dehydrogenase. | Phosphotransferase enzyme family protein. | 0.982 |
GLE_2346 | GLE_2345 | acyl-CoA dehydrogenase. | Transcriptional regulator, LysR family; Belongs to the LysR transcriptional regulatory family. | 0.634 |
GLE_2346 | GLE_2347 | acyl-CoA dehydrogenase. | Oxidoreductase, short chain dehydrogenase/reductase family; Belongs to the short-chain dehydrogenases/reductases (SDR) family. | 0.882 |
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